Pokémon Friends has more than forty types of puzzles, each with several difficulty levels. They are played in series of three: the better you do, the nicer the ball of yarn you earn. Here is the list, based on Serebii; the titles are those of the English version, and the last column shows the content that unlocks them.
| Puzzle | Goal | Content |
|---|---|---|
| Pikachu’s Power Line | Connect all the light bulbs in a single line | Free |
| Sableye’s Twisty Tracks | Assemble the rails to reach the finish | Free |
| Pansage and Pals Café | Are the numbers on both sides equal? | Base Pack |
| Makuhita’s Mighty Moves | Push the boulders to reach the finish | Base Pack |
| Think Outside the Box | Rotate the box to free the Pokémon | Free |
| Leapin’ Litten | Climb the levels to the finish | Free |
| Find the Froakie! | How many Froakie are there? | Base Pack |
| Last Balloon Left | Pick the balloon that won’t pop | Base Pack |
| Greninja’s Secret Shapes | Which shape will the cutout make? | — |
| Lotad’s Ferry Service | Travel on Lotad to the finish | Base Pack |
| Spheal Spinner | Roll Spheal to the finish | Free |
| Pumpkaboo’s Shadow Show | What shape will the shadow have? | Base Pack |
| Tinkatuff Tunneling | Break the rocks to reach the finish | Puzzle On! 1 |
| Morpeko Medals | Circle the medals to turn them yellow | Puzzle On! 1 |
| Flight Paths | Rotate the Pokémon to avoid a collision | Base Pack |
| Who Goes Where? | Fill the empty spots based on the photos | Puzzle On! 2 |
| How Many More? | How many more Pikachu are there? | Puzzle On! 1 |
| Smeargle’s Picky Palette | Paint without letting two identical colors touch | Puzzle On! 1 |
| Medal Match | Bring the medals to their places | Base Pack |
| Secret Stone | Fill in the holes to complete the picture | Base Pack |
| Don’t Wake Gengar! | Light up the corridors without waking Gengar | Puzzle On! 2 |
| Square Solver | Form the perfect square | Puzzle On! 1 |
| Klefki’s Keys | Open the doors to reach the finish | Base Pack |
| Blocked Boxes | How many boxes are hidden? | Puzzle On! 2 |
| Operation: Bath Time | Flood the area to wash away all the dirt | Puzzle On! 1 |
| Shine on Cherrim | Get the light to Cherrim | Base Pack |
| Topsy-Turvy Espeon | Flip gravity to reach the finish | Puzzle On! 2 |
| Take It for a Spin! | What will the object look like as it turns? | Base Pack |
| Yamper the Champ | Take the shortest path | Puzzle On! 1 |
| Dig, Drilbur, Dig! | Connect the tunnels to collect all the mushrooms | Base Pack |
| Tidy Toxel’s Toys | Put all the blocks away in the box | Base Pack |
| Minccino’s Clean Sweep | Clean in the right order up to the trash can | — |
| Stamp-n-Roll | Where will the stamp leave its mark? | Puzzle On! 2 |
| Count on Gimmighoul | Fill in the missing numbers in order | Base Pack |
| Bricks and Ladders | Break the walls to reach the finish | Puzzle On! 2 |
| Don’t Slip Up, Piplup | Slide across the ice to the finish | — |
| Porygon’s Lab | Which 3D shape is in the box? | Puzzle On! 2 |
| Perfect Fit | Choose the block that fills the space | Free |
| Squirtle the Gardener | Draw a path for the water | Base Pack |
